PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_07.3037
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family WRKY
Protein Properties Length: 275aa    MW: 30375.7 Da    PI: 6.7216
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_07.3037genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY104.45.9e-33122179259
                                    --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                           WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                                    +Dgy+WrKYGqK vk+s+fprsYYrCt ++C+vkk+vers++dp+vv++tYeg+H h+
  evm.model.AsparagusV1_07.3037 122 EDGYRWRKYGQKAVKNSPFPRSYYRCTNSKCTVKKRVERSSDDPSVVITTYEGQHCHH 179
                                    8******************************************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 275 aa     Download sequence    
MGDGNPRSEI SGDFGGYFDE FTWNLPLESD RIGFPQPPPL DLTAEEQSRS PPSAPPSARS  60
GDAVSSSSSE GTEAPPEMEE KPPETATSSS TSATNKGTKK GQKRTRQPRV AFMTKSEIDH  120
LEDGYRWRKY GQKAVKNSPF PRSYYRCTNS KCTVKKRVER SSDDPSVVIT TYEGQHCHHT  180
VAFPRGTTLA PVHNALAMSA PPRPQLYFPH LQFTPNHFTS FSLPQSPLVT DQHQQQMQET  240
ITSMSLPTGT TGEGLLSDIV PPSMRNRYID EENL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69310.24e-57WRKY family protein