PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_07.2698
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family WOX
Protein Properties Length: 279aa    MW: 31755.9 Da    PI: 6.3383
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_07.2698genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox59.65.2e-193090357
                                   --SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
                       Homeobox  3 kRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                                   +R+ +t++q+++L el++    r p+ae++++++++l    +++ ++V++WFqN++a+e++
  evm.model.AsparagusV1_07.2698 30 SRWIPTADQIRILRELYYTngVRSPTAEQIQRISARLrqygKIEGKNVFYWFQNHKARERQ 90
                                   8*****************7568*************************************97 PP
2Wus_type_Homeobox110.68.7e-362892265
              Wus_type_Homeobox  2 artRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65
                                   +++RW Pt++Qi+iL+ely+ +G+r+P++e+iqri+a+L++yGkie+kNVfyWFQN+kaRerqk+
  evm.model.AsparagusV1_07.2698 28 SSSRWIPTADQIRILRELYYtNGVRSPTAEQIQRISARLRQYGKIEGKNVFYWFQNHKARERQKK 92
                                   789***************9989*****************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    
MDPSNQYQCN NNGGRSSSTS PSFLCRQSSS RWIPTADQIR ILRELYYTNG VRSPTAEQIQ  60
RISARLRQYG KIEGKNVFYW FQNHKARERQ KKKLTMDNNI THNNNIINSD SNKFNTHTNI  120
VPNYGISSGL YDVGYDYGGS PTAFMERSIR DSCMSLGGGD HGSVVMEPTM PWMYHYIKDE  180
DPPTMVTRQI ETLPLFPTHS KDQEEEEDKE DDDSKYCCNN IDYCAQLNGY HACYLSTATS  240
VNQNQDNYHH HYTANGAAAS LELTLNSYYC STQGFNSM*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17950.14e-37WOX family protein