PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_07.2374 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | B3 | ||||||||
Protein Properties | Length: 200aa MW: 22612.2 Da PI: 10.1753 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 39.3 | 1.2e-12 | 25 | 106 | 14 | 96 |
T-EE--HHH.HTT...---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS B3 14 grlvlpkkfaeeh...ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 +rl+lp kf+++ +++k e +l ++ g sW+v++ + ++ y+ + GW++ ++a+ L g f+vF++ g++ f evm.model.AsparagusV1_07.2374 25 NRLRLPTKFVTNVlatKEIKVE--SASLVNPIGASWNVEVHTNVDQELYIGGLGWSDLAHAHSLGLGYFLVFRYRGDMAF 102 79********777977555555..59999***********6566655588889*********************999998 PP ..EEEE CS B3 91 elvvkv 96 +++ evm.model.AsparagusV1_07.2374 103 --DFRA 106 ..5555 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 200 aa Download sequence |
MRHPLQCASP RSPSFFRVLQ PGFINRLRLP TKFVTNVLAT KEIKVESASL VNPIGASWNV 60 EVHTNVDQEL YIGGLGWSDL AHAHSLGLGY FLVFRYRGDM AFDFRAFDLS TCEISYPSVS 120 QRVSKKLKQR VPVLVRVKEE DKRSNFSPES TVSCIRNKEK ELMKSNAIGG VRFEVELTSY 180 QLWKGRVVSN FILFIVPLS* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G31690.1 | 8e-15 | B3 family protein |