PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_07.2253 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | NAC | ||||||||
Protein Properties | Length: 261aa MW: 29376 Da PI: 7.6182 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 148.5 | 3.3e-46 | 11 | 136 | 3 | 128 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgy 82 pGfrFhPt+eel+++yL++ v+gk+l++ evi ++++y+++Pw+Lp +k +e+ewyfF++rd+k+a+ r+nr+t++g+ evm.model.AsparagusV1_07.2253 11 PGFRFHPTEEELLDFYLRRTVNGKRLNF-EVIGTLNLYRHDPWELPGLAKVGEREWYFFVPRDQKQAK-GRPNRMTTRGF 88 9*************************99.99***************8888899***********9986.69********* PP NAM 83 Wkatgkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128 Wkatg+d+++ s ++l+glkktLv+y+grap g kt+Wvm+eyrl evm.model.AsparagusV1_07.2253 89 WKATGSDRPIRSGsdPKRLIGLKKTLVYYQGRAPCGIKTEWVMNEYRL 136 ***********97666677***************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 261 aa Download sequence |
MDKSGSDLEL PGFRFHPTEE ELLDFYLRRT VNGKRLNFEV IGTLNLYRHD PWELPGLAKV 60 GEREWYFFVP RDQKQAKGRP NRMTTRGFWK ATGSDRPIRS GSDPKRLIGL KKTLVYYQGR 120 APCGIKTEWV MNEYRLPGEG SSSSMGNIVI CKLYRKVTTT MKLQQRAAEQ LANTRASTHI 180 TSPVGIVSFD NFQDLVSAVG GDPANRLTAN TEEGLKPDGE SSSHVFNEEN DTEWLHDALV 240 NQLSSPWADQ SSPYASLLDF * |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G17040.1 | 2e-77 | NAC family protein |