PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_07.1700

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

MYB_related

Protein Properties

Length: 639aa MW: 72718.9 Da PI: 8.8533

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_07.1700	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	26.1	2e-08	582	624	4	44
S-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44 W++ + l++a k ++++ +W+++a ++ g+t +qck ++ evm.model.AsparagusV1_07.1700 582 WSAVQERALIQALKTFPKEtaqRWERVATAVP-GKTVNQCKKKF 624 ******************************.******997 PP

Sequence ? help Back to Top
Protein Sequence Length: 639 aa Download sequence
MDGRTLLITY SPEIIDGEPI LISSNSFPVK ASRFEPAGLA FHLAALKLSG FEEEEDADAD 60 NQSEVSDDKG QTYMTSSDSY STKGKKKSGS GNKQQDHYAL LGLAHLRFLA TEEQIRKSYR 120 ETALKHHPDK QAALLLNEET EEAKQAKKDE IENHFKAIQE AYEVLIDPVK RRVYDSTDEF 180 DDEIPTDCAP QDFFKVFGPA FMRNARWSVT LPVPSLGDER TPLKEVDSFY NFWYGFKSWR 240 EFPHADEFDL EQAESRDHKR WMERQNAKLR EKARKEEHAR VRTLVDNAYK KDPRILRRKE 300 EEKAEKKRKK EAKYLAKKQQ EEEAARAAEE ERRLKEEADK KAAEAASNQK KQKEKEKKVL 360 RKERTRLRTL SSSIVSKTSI DISEDDVESV CMSLDIDRLK SLCDKMEGKD ETDRIQLLKD 420 ALGKGNSNVP KPEEKSPHVN GVGSQIKPGS VLNNYEKKER PWGKEEIEML RKGMVKYPKG 480 TSRRWEVISE YIGTGRSVEE ILKATKTVLL QKPDSAKAFD SFLEKRKPAQ AIASPLTTRA 540 ESDGVPLTLK QEKSDEKATK ETPSSDGLAT NGVSSSNAED IWSAVQERAL IQALKTFPKE 600 TAQRWERVAT AVPGKTVNQC KKKFALMKES FRNKKSAD*

Sequence ? help Back to Top

Protein Sequence Length: 639 aa Download sequence

MDGRTLLITY SPEIIDGEPI LISSNSFPVK ASRFEPAGLA FHLAALKLSG FEEEEDADAD  60
NQSEVSDDKG QTYMTSSDSY STKGKKKSGS GNKQQDHYAL LGLAHLRFLA TEEQIRKSYR  120
ETALKHHPDK QAALLLNEET EEAKQAKKDE IENHFKAIQE AYEVLIDPVK RRVYDSTDEF  180
DDEIPTDCAP QDFFKVFGPA FMRNARWSVT LPVPSLGDER TPLKEVDSFY NFWYGFKSWR  240
EFPHADEFDL EQAESRDHKR WMERQNAKLR EKARKEEHAR VRTLVDNAYK KDPRILRRKE  300
EEKAEKKRKK EAKYLAKKQQ EEEAARAAEE ERRLKEEADK KAAEAASNQK KQKEKEKKVL  360
RKERTRLRTL SSSIVSKTSI DISEDDVESV CMSLDIDRLK SLCDKMEGKD ETDRIQLLKD  420
ALGKGNSNVP KPEEKSPHVN GVGSQIKPGS VLNNYEKKER PWGKEEIEML RKGMVKYPKG  480
TSRRWEVISE YIGTGRSVEE ILKATKTVLL QKPDSAKAFD SFLEKRKPAQ AIASPLTTRA  540
ESDGVPLTLK QEKSDEKATK ETPSSDGLAT NGVSSSNAED IWSAVQERAL IQALKTFPKE  600
TAQRWERVAT AVPGKTVNQC KKKFALMKES FRNKKSAD*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	306	310	KKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G11450.1	1e-122	MYB family protein