PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_07.1632
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family bHLH
Protein Properties Length: 348aa    MW: 39989.4 Da    PI: 9.0648
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_07.1632genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.95e-10171221255
                                    HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                            HLH   2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                                    + +  + Er RR+++N+ ++ LrellPk+   + kKls   +  ++ +YI +Lq
  evm.model.AsparagusV1_07.1632 171 KSSQHAYERDRREKLNKLYSSLRELLPKD---KRKKLSIPCTIARVLKYIPELQ 221
                                    5666788**********************...*******************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 348 aa     Download sequence    
MIRSAMMTTT FPLDNSYRPI FLNENLKPAN ALAIGACHVD PERAKNPRLV YDLGVQDYIN  60
FLCTMNYTET QIKKFMPEPS SCSKFGGGVR DLNYLSFVAI FDAETKERML TRTLTKVSEL  120
LEMNSLPSQR MGRDYNLNET DTSMSMSSLS PRRQDTDHDD GKKKISNAVK KSSQHAYERD  180
RREKLNKLYS SLRELLPKDK RKKLSIPCTI ARVLKYIPEL QKCVERLKSS REELLLRASN  240
DEFDSNCDKG MMNPVISAIC LSKREIMIQI CIFNTSSMIT FSKIIKILER EELQLLNATT  300
HTTHDDKTLY SLHLQAKKAM RIMEKEIFCE KLMNSVNEQT MCTKTVL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41240.21e-20bHLH family protein