PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_06.885 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | NAC | ||||||||
Protein Properties | Length: 114aa MW: 13357.2 Da PI: 9.456 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 70.2 | 5.3e-22 | 16 | 92 | 52 | 128 |
NAM 52 kaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykg.rapkgektdWvmheyrl 128 +++e +wyfF+ r +ky+ g+r+ r+t sg+Wk tg ++e+ + +g+++g+++tL fy g ++ + ++t+W+m ey++ evm.model.AsparagusV1_06.885 16 SQQEGRWYFFTDRTRKYRGGNRPARSTPSGFWKLTGLKTEIEH-NGKKMGVRNTLNFYWGlQQGENSRTEWMMREYSI 92 345569************************************9.999***********887888889*********86 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 114 aa Download sequence |
MLIVVYCCNA ERYESSQQEG RWYFFTDRTR KYRGGNRPAR STPSGFWKLT GLKTEIEHNG 60 KKMGVRNTLN FYWGLQQGEN SRTEWMMREY SIKEFQIPKE PAGLEVMNPA PCF* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G46770.1 | 2e-16 | NAC family protein |