PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_06.597
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family bHLH
Protein Properties Length: 163aa    MW: 18170.5 Da    PI: 5.4919
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_06.597genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH11.60.0005132493754
                                  -STCHHHHHHHHHHHHHH CS
                           HLH 37 KlsKaeiLekAveYIksL 54
                                   ls  + L +A++YIk+L
  evm.model.AsparagusV1_06.597 32 ALSQYDHLDHAIDYIKKL 49
                                  58999***********99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 163 aa     Download sequence    
MATPQESFAT SDHDLPPCLH LHYGENCHHA DALSQYDHLD HAIDYIKKLS ERIERLKQRK  60
NSVTGEASDK ESDGGMAGEL GLPVVEVRHQ DSIVEVVLIT SLKTSFVFHE TIKVLEEEGI  120
DVLNAGFSVV RDKIFYTIHS QVVSSINDFE ASKVSERLKK LI*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.16e-19bHLH family protein