PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_06.588 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | bHLH | ||||||||
Protein Properties | Length: 258aa MW: 28676.9 Da PI: 6.7869 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 31 | 4.7e-10 | 169 | 212 | 7 | 55 |
HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 ++ ++RR+ri +++ L++l+P+ +K++ +++LekA+ Y+k Lq evm.model.AsparagusV1_06.588 169 IAAKNRRERISERLKVLQDLVPNG-----TKVDLVTMLEKAISYVKFLQ 212 5679******************97.....8******************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 258 aa Download sequence |
MALAKERIRQ NSQSSFSQGI DPSTIEFFGS ESHIPISNFA FMNALPYEAQ SSARVNNWAY 60 TNSSLLSFEQ SKLDNEEACA LWIDSMDHDQ YGSNCANSRS LSQDYGEDRF GFLYPDSSSM 120 DSVQDSGEVE RSSQKRPYMS GDVQVSKKLC GNNKKAKAKP SPSKDPQSIA AKNRRERISE 180 RLKVLQDLVP NGTKVDLVTM LEKAISYVKF LQLQVKVLAT DEFWPAQGGR APEIAQVKEA 240 IDAILSSHRD RNSSSKQ* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G66470.1 | 2e-53 | bHLH family protein |