PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_06.309
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family G2-like
Protein Properties Length: 338aa    MW: 38662.2 Da    PI: 5.8228
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_06.309genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like98.44.9e-31153207155
                       G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                                   kpr+rWtpeLHerFv+a++qLGG++++tP++il  m+++g+t++hvkSHLQkYRl
  evm.model.AsparagusV1_06.309 153 KPRMRWTPELHERFVQAINQLGGPDRTTPRSILIKMGIDGITVDHVKSHLQKYRL 207
                                   79****************************************************8 PP
2Myb_DNA-binding55.61.2e-17155206148
                                   TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
               Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 
                                   r+rWT+e++e++v+a++qlGg+   t+++I  +mg  g t  ++ks++qky+
  evm.model.AsparagusV1_06.309 155 RMRWTPELHERFVQAINQLGGPdrtTPRSILIKMGiDGITVDHVKSHLQKYR 206
                                   89*************************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 338 aa     Download sequence    
MNMSCYNGRT LDDITDNLSL LYNANDSNFQ STCSANLADV IPSQSSMFPI NMQEQYPSTG  60
DIHNQEPTSK NFESILLNDD TSYKLDESFD SDVVMDALLS DTVNQSSETH YMNVEINEAN  120
LEAEKFLSPF ELSKIHTFSQ KELPNIRRVE VAKPRMRWTP ELHERFVQAI NQLGGPDRTT  180
PRSILIKMGI DGITVDHVKS HLQKYRLAKY QPEAKQDKRV SCLEGKKRNS NEKDNKVSKL  240
SSEELGMLQT QWQLQKTLHD QLKITRELHL QTKENARRFQ EFVENQSKLQ EAFMQATQSL  300
SSTYTSVDDG LLNHNHTDES CFVESNGLRL AKKARFN*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01060.18e-37G2-like family protein