PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_05.86 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | B3 | ||||||||
Protein Properties | Length: 226aa MW: 25671.2 Da PI: 9.7479 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 56.2 | 6.1e-18 | 129 | 219 | 1 | 99 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvF 82 f+k +++s+++ +l lp++f+++h +k+ t++l de+g + + ++ rkk+ l++GW++F ++L +gD +vF evm.model.AsparagusV1_05.86 129 FIKPMLQSHTTGGFWLGLPNQFCSKHL-PKND-STIILIDEDGSKSDTTYLARKKG----LSAGWRGFSINHDLVDGDALVF 204 89************************4.4434.49***************667776....9********************* PP EE-SSSEE..EEEEE-S CS B3 83 kldgrsefelvvkvfrk 99 +l+++s+f +v +fr+ evm.model.AsparagusV1_05.86 205 QLINSSTF--KVYIFRA 219 ***98888..9999996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 226 aa Download sequence |
MATEVQESYE ELRRKKLEEN KRKLDELKLH YISSSLREAS ASPKPSPVKR VKRQALEPSP 60 IKRRSDRIAN LPEPAYKEVI PDVVPRPRKM ISKHRDLSGR VYASDEARAY TIEKAEQLEA 120 ELGNEHPSFI KPMLQSHTTG GFWLGLPNQF CSKHLPKNDS TIILIDEDGS KSDTTYLARK 180 KGLSAGWRGF SINHDLVDGD ALVFQLINSS TFKVYIFRAR EYDSS* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G19184.1 | 1e-57 | B3 family protein |