PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_05.768 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | B3 | ||||||||
Protein Properties | Length: 250aa MW: 27869 Da PI: 7.3425 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 66.3 | 4.4e-21 | 130 | 217 | 1 | 83 |
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT- CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangL 74 f+k+lt sd++++g +++p++ ae++ + +++ ++l+ +d++ ++W++++iyr++++r++lt+GW+ Fv+ ++L evm.model.AsparagusV1_05.768 130 FCKTLTASDTSTHGGFSVPRRAAEKIfppldfsM-QPPA-QELQARDLHDNVWTFRHIYRGQPKRHLLTTGWSLFVSGKRL 208 99*****************************954.4444.49*************************************** PP -TT-EEEEE CS B3 75 kegDfvvFk 83 +gD+v+F evm.model.AsparagusV1_05.768 209 FAGDSVLFI 217 *******95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 250 aa Download sequence |
MKGGPVNGAV TAASPLEAER RTINQELWHA CAGPLVTLPP VGSLVVYFPQ GHSEQVAASM 60 QKNVDAQIPS YPNLPSKLIC LLHNVTLHAD AETDEVYAQM TLQPVNSYDE KALLASDLAL 120 KSNKPQTEFF CKTLTASDTS THGGFSVPRR AAEKIFPPLD FSMQPPAQEL QARDLHDNVW 180 TFRHIYRGQP KRHLLTTGWS LFVSGKRLFA GDSVLFIRYL IVLRAFIGKD DYLNTTHFIY 240 LYHEFIMIL* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G19220.1 | 1e-114 | ARF family protein |