PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_05.2922

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

TALE

Protein Properties

Length: 441aa MW: 50571.6 Da PI: 6.3069

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_05.2922	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	24.7	3.9e-08	362	400	18	54
HHHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 18 lFek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 +F++ ++yp+ +++ LA + gLt +qV++WF N R + evm.model.AsparagusV1_05.2922 362 MFQNflHPYPKDNDKHLLALQSGLTRSQVSNWFINARVR 400 5887779******************************88 PP
2	BELL	61.4	2e-20	235	304	3	72
BELL 3 qelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 +e+++ k+kL+ +l++Vd+ Ykqy +++q vis F + s ++ +++Al+++S F++L+++i ++i evm.model.AsparagusV1_05.2922 235 EENKAEKNKLVAMLQMVDHSYKQYLDNIQKVISTFYDASNSSSPQILAHFALHTLSSTFKNLRERIQSHI 304 589999************************************************************9997 PP

Sequence ? help Back to Top
Protein Sequence Length: 441 aa Download sequence
MENDIFSASL QTDQSHTIFN AASSHIFSSS LIQPSIIDHN TNERIFARNP LPSNVQEEFL 60 NNLYVPNYCG MPNGSSFEAY NENANMGSLS NFLPMNMRSL DSSNLFNSDY EIRNGPIQNE 120 FMKIMSTVHP SYHVNGSTLP RNELSLSLGS SEKSSSVVTQ ATPKESEELS LYCGPLSSIH 180 FSHVLSGSRY IDLAQEILGE VVNYAVGNFE EIDDSFSGIE GEMKSREDME QFVIEENKAE 240 KNKLVAMLQM VDHSYKQYLD NIQKVISTFY DASNSSSPQI LAHFALHTLS STFKNLRERI 300 QSHILLSNEE RSRGYTKGKE KYFEHSFIQK QWTLQMGRKD QQCWRPQRGL PERSVSVLRA 360 WMFQNFLHPY PKDNDKHLLA LQSGLTRSQV SNWFINARVR LWKPMIEEMY SEIRKHQTDN 420 RIESDFECHG NISNPRRLTN *

Sequence ? help Back to Top

Protein Sequence Length: 441 aa Download sequence

MENDIFSASL QTDQSHTIFN AASSHIFSSS LIQPSIIDHN TNERIFARNP LPSNVQEEFL  60
NNLYVPNYCG MPNGSSFEAY NENANMGSLS NFLPMNMRSL DSSNLFNSDY EIRNGPIQNE  120
FMKIMSTVHP SYHVNGSTLP RNELSLSLGS SEKSSSVVTQ ATPKESEELS LYCGPLSSIH  180
FSHVLSGSRY IDLAQEILGE VVNYAVGNFE EIDDSFSGIE GEMKSREDME QFVIEENKAE  240
KNKLVAMLQM VDHSYKQYLD NIQKVISTFY DASNSSSPQI LAHFALHTLS STFKNLRERI  300
QSHILLSNEE RSRGYTKGKE KYFEHSFIQK QWTLQMGRKD QQCWRPQRGL PERSVSVLRA  360
WMFQNFLHPY PKDNDKHLLA LQSGLTRSQV SNWFINARVR LWKPMIEEMY SEIRKHQTDN  420
RIESDFECHG NISNPRRLTN *

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32980.1	3e-67	TALE family protein