PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_05.2651
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family B3
Protein Properties Length: 449aa    MW: 51488.7 Da    PI: 8.8634
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_05.2651genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B361.31.6e-1917106199
                                    EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EE CS
                             B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfv 80 
                                    ffkvl     +k+ rl +p +f+++++++   s++ +le ++g sW v++  +++ +++++++GW++Fv+++ Lke +f+
  evm.model.AsparagusV1_05.2651  17 FFKVL--IGEFKL-RLKMPPNFLKHISNE--ASQKAMLEGPNGCSWPVEI--TRSFDGTFISSGWSKFVEDHSLKEQEFL 89 
                                    66777..666777.4999*****777644..6679***************..**************************** PP

                                    EEEE-SSSEE..EEEEE-S CS
                             B3  81 vFkldgrsefelvvkvfrk 99 
                                    vF+++g++ f   ++vf++
  evm.model.AsparagusV1_05.2651  90 VFRYNGNMHF--SIQVFDT 106
                                    ******9999..8998886 PP
2B356.55.1e-183444241499
                                    T-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE...EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS
                             B3  14 grlvlpkkfaeehggkkeesktltledesgrsWevkliy.rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 
                                     r+++p +f ++h    ++++ +tl+d++grsW+v +   +k ++   l+ GW eF++ n+L++gD + F+l+g    e+
  evm.model.AsparagusV1_05.2651 344 ERMRFPLSFSKKHLP--RKKTSMTLRDPNGRSWTVAYVAaEKDRD--RLSIGWGEFAQGNNLDVGDYCAFELIG--PNEM 417
                                    689**********53..34557***************76444444..4999*********************99..5667 PP

                                    EEEEE-S CS
                             B3  93 vvkvfrk 99 
                                    +v++fr+
  evm.model.AsparagusV1_05.2651 418 RVHIFRA 424
                                    9***996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 449 aa     Download sequence    
MGEKKKEGNE LQRKPHFFKV LIGEFKLRLK MPPNFLKHIS NEASQKAMLE GPNGCSWPVE  60
ITRSFDGTFI SSGWSKFVED HSLKEQEFLV FRYNGNMHFS IQVFDTTACE REDLFPIQSY  120
MKPKLPKERK KRGRPRKHPL NVVCHIECKE TKSEPQELPT CDGHEAKHMQ DDIINSVEDS  180
FLSYQKLKLT KGGKKRGRPR KHPPDVVRCV EHHEIKSEHM HDDIINLVED SFLSCKKLKL  240
TTGERKRGRP RKHPPDVVHQ IEHQETKGSR VATLSPNEEG KVKLETEELS SSSIASENPN  300
ERGYFSRRRL VTTTEQLRAE EAARSFSSDL PFVIRPMALS SIYERMRFPL SFSKKHLPRK  360
KTSMTLRDPN GRSWTVAYVA AEKDRDRLSI GWGEFAQGNN LDVGDYCAFE LIGPNEMRVH  420
IFRAVEDTIP AVEETAPAVE TPEIVGLD*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34400.12e-16B3 family protein