PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_05.183 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | MYB_related | ||||||||
Protein Properties | Length: 199aa MW: 22978.3 Da PI: 11.2872 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 55.2 | 1.6e-17 | 63 | 106 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T+eE++l+++++ ++G++ W++Ia++++ gRt++++k++w++ evm.model.AsparagusV1_05.183 63 RGNITPEEQLLILELHSRWGNR-WSKIAQHLP-GRTDNEIKNYWRT 106 7999******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 199 aa Download sequence |
MEGFDGMNVW PLEHGPQNMR RREKGLINLE DIVTWKRAEN GLKRTGKSCR LRWLNYLRPD 60 VRRGNITPEE QLLILELHSR WGNRWSKIAQ HLPGRTDNEI KNYWRTRVQK HAKQLKCDVN 120 SKQFKDVMRY LWMPRLHRKN SGGERLGRRA AEYQNLAPAW AVTGPRPRAG EAQLSPPSTV 180 TAGEDKGGGG VQLRPVRQ* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G48000.1 | 7e-60 | MYB family protein |