PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_04.938 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | G2-like | ||||||||
Protein Properties | Length: 237aa MW: 26074.4 Da PI: 8.3913 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 49.9 | 6.9e-16 | 11 | 40 | 26 | 55 |
G2-like 26 kAtPktilelmkvkgLtlehvkSHLQkYRl 55 +AtPk++l+lm++kgLtl+h+kSHLQkYRl evm.model.AsparagusV1_04.938 11 EATPKSVLRLMGMKGLTLYHLKSHLQKYRL 40 7****************************8 PP | |||||||
2 | Myb_DNA-binding | 28.6 | 3.4e-09 | 13 | 39 | 23 | 48 |
-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 23 tWktIartmg.kgRtlkqcksrwqkyl 48 t+k++ r mg kg+tl+++ks++qky+ evm.model.AsparagusV1_04.938 13 TPKSVLRLMGmKGLTLYHLKSHLQKYR 39 79************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 237 aa Download sequence |
MIAPKLCILA EATPKSVLRL MGMKGLTLYH LKSHLQKYRL GKQARKETGL LDANKNGSSS 60 GVNYSSATNS DVSRGNNGGE MPLAESLRYQ IEVQRKLQEQ LEVQKKLQMR IEAQGKYLQA 120 ILEKAQKSLS YDVNDTENIE ESRAQLTDFN LNLSGLMENV SNIVSEDNKK TESGKAKAHV 180 SGFRLYQEDT EDTADVKFPS GGGSQHLDLN MKGGGYDLFG GTLGSELDLR MQLQGR* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G45580.1 | 3e-37 | G2-like family protein |