PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_04.930
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family bHLH
Protein Properties Length: 302aa    MW: 34612.2 Da    PI: 6.866
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_04.930genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.24e-1069119255
                                   HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                           HLH   2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                                   + +  + Er RR+++N+ ++ LrellPk+   + kKls   +  ++ +YI +Lq
  evm.model.AsparagusV1_04.930  69 KSSQHAYERDRREKLNKLYSSLRELLPKD---KRKKLSIPCTIARVLKYIPELQ 119
                                   5666788**********************...*******************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 302 aa     Download sequence    
MLPLSPSIVE AFEWQLEENM INELHCDDLF ADYNLNETDT SMSMSSLSPR RQDTDHDDGK  60
KKISNAVKKS SQHAYERDRR EKLNKLYSSL RELLPKDKRK KLSIPCTIAR VLKYIPELQK  120
CVERLKSSRE ELLLRASNDE FDSNCDKGMM NPVISAICLS KREIMIQICI FNTSSMITFS  180
KIIKILEREE LQLLNATTHT THDDKTLYSL HLQEDGKTKI SPDKEETKVV LREARCHSPP  240
QSPLSNPTTN ALISVGDDDD VDEDDKVPVG RRRRGREVKT RTGEEEDDEG PKVGGRRRRR  300
P*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41240.29e-21bHLH family protein