PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_04.928
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family bHLH
Protein Properties Length: 324aa    MW: 36778.6 Da    PI: 4.7889
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_04.928genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH407e-13159200854
                                   HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                           HLH   8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                                    Er+RR+++N++++ Lr+l+P++     +K + a+i+  A++YIk+L
  evm.model.AsparagusV1_04.928 159 TERQRREHLNEKYFALRSLVPNP-----TKKDRASIVGDAIDYIKEL 200
                                   5**********************.....9****************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 324 aa     Download sequence    
MYEDSGYFDP YKIPDSNSIN NNELDDNLCI DLEDATASIT FDLLQEDISV APQMETVNWD  60
STNYQMYTNP TCGPAPNLLN LIHLPTAAAS IPFDNSMSYD PLMQTGYTVG AQPNVLRDLY  120
QSLPQNYGLF CGVERGVFQE MDFRRGDIKG EVKGNLVNTE RQRREHLNEK YFALRSLVPN  180
PTKKDRASIV GDAIDYIKEL HRTVDELKIL VEKKKHGRDR KRVLIADDEA SGDMESTCVR  240
PVREEDHPLN GALRCSWLQR KSKESFVDVR IIDDEVNIKL NQKKKPNCLL YVAKILEELQ  300
LDLVHVAGGN IGDNYIFMLN TKV*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31220.11e-60bHLH family protein