PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_04.3272
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family MYB_related
Protein Properties Length: 280aa    MW: 31483.4 Da    PI: 7.0199
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_04.3272genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding38.23.3e-123882347
                                   SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
                Myb_DNA-binding  3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                                   +WT+eE+  ++ + ++lG+g+W+ I+r +   Rt+ q+ s+ qky
  evm.model.AsparagusV1_04.3272 38 PWTEEEHRMFLLGLQKLGKGDWRGISRNFVISRTPTQVASHAQKY 82
                                   8*****************************99************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 280 aa     Download sequence    
FPPIRSGDYL QERLRTTYAT SSKSDEYQLR CLTAKGVPWT EEEHRMFLLG LQKLGKGDWR  60
GISRNFVISR TPTQVASHAQ KYFIRQTNTN RRKRRSSLFD IVPDEAAESQ FFPVNDQESD  120
NHDNAPLPPP NMDEECESMD SNNSIDGEAT IQNPEPSQCT YTTQETLQCI YPVMYPTFLT  180
PVLPYPLPLW TCSTADTAEK RTHEVLKPTP VLSRAPINVD ELLGMSNLSI GEQIVDKPSP  240
LVKNSIRDSG RQSAFHAKPP SSGSTVKSRV RREISIRGP*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47390.13e-73MYB_related family protein