PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_04.3243 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | ERF | ||||||||
Protein Properties | Length: 142aa MW: 15906 Da PI: 9.4856 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 63.4 | 5e-20 | 75 | 125 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+++AeIrdp g k +r++lg+f tae+Aa a+++a+ +++g evm.model.AsparagusV1_04.3243 75 HYRGVRRRP-WGKFAAEIRDP---GrKGARVWLGTFETAEDAAMAYDKAAYRMRG 125 8********.**********9...8677*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 142 aa Download sequence |
MHLLDGSTAK KFRRSSSFNT LISDNWRENP FIANDPDDMV VFETLSYAFA HGWIPSDSGE 60 VKAESEPPPP PAEKHYRGVR RRPWGKFAAE IRDPGRKGAR VWLGTFETAE DAAMAYDKAA 120 YRMRGSRAML NFPLGFVVLV V* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G44840.1 | 1e-30 | ERF family protein |