PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_04.3217 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | MYB_related | ||||||||
Protein Properties | Length: 243aa MW: 26491.6 Da PI: 9.9229 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 46 | 1.2e-14 | 80 | 124 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE+ ++ + ++lG+g+W+ I+r + ++Rt+ q+ s+ qky evm.model.AsparagusV1_04.3217 80 PWTEEEHRTFLAGLEKLGKGDWRGISRNFVTTRTPTQVASHAQKY 124 8*******************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 243 aa Download sequence |
MEKEKGVKLF GVRIEASPAA VEAEEEVMRK SYSTGNLASC TAAVRSSDHV AGDHGYLSDG 60 GLVLENSRSK ARQERKRGVP WTEEEHRTFL AGLEKLGKGD WRGISRNFVT TRTPTQVASH 120 AQKYFLRKSN PNKKKRRSSL FDVGINDNDI PKKVHLFGDG TNCQSKDNHL VNSPSPIATP 180 ALLPRVTEHV GANSRDQASS NFGQDFLQLS SANSPSVDNS DLELRISPPN QSNLLAGAIR 240 VI* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 133 | 137 | KKKRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G47390.1 | 1e-37 | MYB_related family protein |