PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_04.2928 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | NAC | ||||||||
Protein Properties | Length: 192aa MW: 21993.3 Da PI: 4.7075 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 102.2 | 6.8e-32 | 4 | 115 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk. 79 lppGf+F P+deelv ++L +k+ g++ ++i+++d+y+++Pw+L+ k+ ++ + wyfFs++++ nrat evm.model.AsparagusV1_04.2928 4 LPPGFQFFPSDEELVIHFLYRKALGHR----DIIPSLDLYTHDPWELDGKALQGGNYWYFFSQKAR--------NRATGp 71 79***********************99....67**************977778899******9977........555544 PP NAM 80 sgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 sg W + d++v+s ++e+vg+kkt++fy +g kt+Wvmhey+l evm.model.AsparagusV1_04.2928 72 SGCWDSEADDEPVTS-GRENVGVKKTFAFY----ADGIKTSWVMHEYHL 115 9**************.999***********....7999*********98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 192 aa Download sequence |
MTSLPPGFQF FPSDEELVIH FLYRKALGHR DIIPSLDLYT HDPWELDGKA LQGGNYWYFF 60 SQKARNRATG PSGCWDSEAD DEPVTSGREN VGVKKTFAFY ADGIKTSWVM HEYHLLQRVD 120 RDGSTSSNGR RSSRRKGNPR MGDNKWVICR VYDSSYDSDQ LRLYEEGMEL SCLDEAFLSL 180 DDDLDDISWP N* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G64530.1 | 4e-41 | NAC family protein |