PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_04.2475

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

HB-other

Protein Properties

Length: 280aa MW: 31720.1 Da PI: 5.9478

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_04.2475	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.8	2.1e-09	62	99	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yps ++ LA+++gL+ +qV++WF N R + evm.model.AsparagusV1_04.2475 62 FEHflHPYPSDVDKHILARQTGLSRSQVSNWFINARVR 99 664559******************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 280 aa Download sequence
MGEKDPVVPG STKGETPRLK LLDQRIRQQQ SLQQGGAMES HPWRPQRGLP ERSVSILRAW 60 LFEHFLHPYP SDVDKHILAR QTGLSRSQVS NWFINARVRL WKPMVEEMYM EETKEQDNQH 120 SSQGTPECES NDNNSRPNST LLRSNQNPNP ISSLDEDHEH KPFSSHPRID SDSLTSMINK 180 HQVPRAENLG VVDLDFSAYN ESSSSQNFGN GVSLTLGLQQ HTGGGMSLSF SPTNQQTMFF 240 SREQMEDCQP VQFSILDGEG QNLRYRNLME AQMLHDFAG*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G41410.1	1e-57	TALE family protein