PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_04.1519 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | NAC | ||||||||
Protein Properties | Length: 222aa MW: 25183.5 Da PI: 9.1548 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 141.1 | 6.6e-44 | 8 | 133 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrkn.ratk 79 lppGfrFhPtdeelvveyLkkk+ + +l++ +i+++d + +PwdLp + ++ e yfF ++ +y+++ r+n rat evm.model.AsparagusV1_04.1519 8 LPPGFRFHPTDEELVVEYLKKKAMSCPLPA-AIISDIDFRSRDPWDLPGC---HDGERYFFNLQEANYRKSGRSNiRATM 83 79***************************9.88***************54...66799***********97777626*** PP NAM 80 sgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 sgyWkatg++k++l++ +e vg+kk+Lvf++g+ p+g++t+Wvmheyrl evm.model.AsparagusV1_04.1519 84 SGYWKATGREKTILCSkLNEIVGMKKVLVFHQGKPPHGVRTHWVMHEYRL 133 *************99845677***************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 222 aa Download sequence |
MEKLIMRLPP GFRFHPTDEE LVVEYLKKKA MSCPLPAAII SDIDFRSRDP WDLPGCHDGE 60 RYFFNLQEAN YRKSGRSNIR ATMSGYWKAT GREKTILCSK LNEIVGMKKV LVFHQGKPPH 120 GVRTHWVMHE YRLAGPDQTK NPSQQQYSLV QGQNWVVSRI FMKKKGTSKM KENTVQCYSN 180 SRAGDDRNNH GDFGPQSPPS SCVTDLSDEE EGSKGEEANS K* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G13180.1 | 1e-63 | NAC family protein |