PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_03.916

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

SBP

Protein Properties

Length: 299aa MW: 32642.9 Da PI: 9.4301

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_03.916	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	130.5	6.1e-41	118	194	1	77
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 +Cq+egC adl++ak+yhrrhkvCe+hska+ v+++gl+qrfCqqCsrfh l efD++krsCr+rLa+hn+rrrk+q evm.model.AsparagusV1_03.916 118 RCQAEGCGADLTHAKHYHRRHKVCEFHSKASIVIAAGLSQRFCQQCSRFHVLAEFDQGKRSCRKRLADHNRRRRKSQ 194 6**************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 299 aa Download sequence
MLEYEWGNPA AAAAAMLLFG EELGSYQSHP DQVQHHHHQV FDNFDHGLGM DFFHQQPQPQ 60 QISAAALLTT AAMTPAPARI GLNLGGRTYF SSGSREEEMM MMAAAGRVCG RRRTRTARCQ 120 AEGCGADLTH AKHYHRRHKV CEFHSKASIV IAAGLSQRFC QQCSRFHVLA EFDQGKRSCR 180 KRLADHNRRR RKSQDLSTAI ATTPTPTINS QNSNNSSTDH KPVMITETKP DTISSLTNTS 240 SPPQPPKNIS APPMVLGLGC GRLPSAATGS RLFIDRIIAP PECVISAHSR SFVGMNTG*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G02065.1	6e-48	SBP family protein