PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_03.68

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

NAC

Protein Properties

Length: 384aa MW: 42883 Da PI: 6.9366

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_03.68	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	175.9	1.1e-54	3	134	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksg 81 lppGfrFhPtdeel+++yL kkv ++ +++ +i evd++++ePwdLp + + +ekewyfFs rd+ky+tg r+nrat+sg evm.model.AsparagusV1_03.68 3 LPPGFRFHPTDEELITHYLSKKVLDEAFSA-IAIGEVDLNRCEPWDLPwRGGSMGEKEWYFFSVRDRKYPTGLRTNRATESG 83 79***********************999.88***********666666999********************* PP NAM 82 yWkatgkdkevlsk...kgelvglkktLvfykgrapkgektdWvmheyrle 129 yWkatgkdke+++ ++ lvg+kktLvfy+grapkg+kt+Wvmheyrle evm.model.AsparagusV1_03.68 84 YWKATGKDKEIHRPavrSTLLVGMKKTLVFYRGRAPKGHKTNWVMHEYRLE 134 ********987656666**************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 384 aa Download sequence
MELPPGFRFH PTDEELITHY LSKKVLDEAF SAIAIGEVDL NRCEPWDLPW RGGSMGEKEW 60 YFFSVRDRKY PTGLRTNRAT ESGYWKATGK DKEIHRPAVR STLLVGMKKT LVFYRGRAPK 120 GHKTNWVMHE YRLEGKYTRV YDLPTSALFK QREWVICRVF KKGSSSDVEV TAAAAASSIR 180 NMMGLINHGS CSVASYNYNE SSRELEYHLG GDPRTTTSTN KDDDDEEGNR PLLPPLMDAT 240 VISPNCKVDR RNRSASEPPE AHVTCFSSIT VSEDEKGPNE GDCFNNNPLV FHYSSSASSN 300 FLHSVFNSFK MMNSTPPTSG LLGNSNTSFI PDPDPDPNPN SSLKQLLQSN LYGAATMEHK 360 HCKTTDCCKD VLTTLSPETA PNS*

Sequence ? help Back to Top

Protein Sequence Length: 384 aa Download sequence

MELPPGFRFH PTDEELITHY LSKKVLDEAF SAIAIGEVDL NRCEPWDLPW RGGSMGEKEW  60
YFFSVRDRKY PTGLRTNRAT ESGYWKATGK DKEIHRPAVR STLLVGMKKT LVFYRGRAPK  120
GHKTNWVMHE YRLEGKYTRV YDLPTSALFK QREWVICRVF KKGSSSDVEV TAAAAASSIR  180
NMMGLINHGS CSVASYNYNE SSRELEYHLG GDPRTTTSTN KDDDDEEGNR PLLPPLMDAT  240
VISPNCKVDR RNRSASEPPE AHVTCFSSIT VSEDEKGPNE GDCFNNNPLV FHYSSSASSN  300
FLHSVFNSFK MMNSTPPTSG LLGNSNTSFI PDPDPDPNPN SSLKQLLQSN LYGAATMEHK  360
HCKTTDCCKD VLTTLSPETA PNS*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G61430.1	4e-86	NAC family protein