PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_03.586

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

WRKY

Protein Properties

Length: 357aa MW: 40178.6 Da PI: 10.4344

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_03.586	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	100.4	1.1e-31	289	346	3	59
-SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 D+y+WrKYGqK++kgs++pr+YY+C+s gCp++k+ver+ +dp+++++tYegeHnh+ evm.model.AsparagusV1_03.586 289 DEYSWRKYGQKPIKGSPHPRGYYKCSSMrGCPARKHVERCVDDPSMLIVTYEGEHNHT 346 9**********************9988**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 357 aa Download sequence
MKMEEVEEAN RAAVESCHRV LSHLSQSKDQ VQYRNLMVET GEAVSKFRKV VSLLGNGVGH 60 ARVRKSKKTH SFNHKIFLDN PLVASKQTTS IPNPAQLIPR TLLTISTPDL DSTPKPPHHH 120 HQFSHKMFLE NPMLEQHHNS SSSHSHHFQY LQHQQQQSTH QRFQHFQHQM KLQAEMFKRS 180 SSGINLKFDN SSCTPTVSST RSFLSSLSMD GSVASLEGKP FQLIGGSQSS EPVTLHPPPK 240 RRCTGRGEDG NGKCATSGRC HCSKRRKLRV KRSIKVPAIS NKLADIPPDE YSWRKYGQKP 300 IKGSPHPRGY YKCSSMRGCP ARKHVERCVD DPSMLIVTYE GEHNHTRLLA QSTTTT*

Sequence ? help Back to Top

Protein Sequence Length: 357 aa Download sequence

MKMEEVEEAN RAAVESCHRV LSHLSQSKDQ VQYRNLMVET GEAVSKFRKV VSLLGNGVGH  60
ARVRKSKKTH SFNHKIFLDN PLVASKQTTS IPNPAQLIPR TLLTISTPDL DSTPKPPHHH  120
HQFSHKMFLE NPMLEQHHNS SSSHSHHFQY LQHQQQQSTH QRFQHFQHQM KLQAEMFKRS  180
SSGINLKFDN SSCTPTVSST RSFLSSLSMD GSVASLEGKP FQLIGGSQSS EPVTLHPPPK  240
RRCTGRGEDG NGKCATSGRC HCSKRRKLRV KRSIKVPAIS NKLADIPPDE YSWRKYGQKP  300
IKGSPHPRGY YKCSSMRGCP ARKHVERCVD DPSMLIVTYE GEHNHTRLLA QSTTTT*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04670.1	4e-85	WRKY family protein