PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_03.2270 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | B3 | ||||||||
Protein Properties | Length: 422aa MW: 47181.9 Da PI: 8.924 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 50.1 | 4.8e-16 | 11 | 94 | 1 | 90 |
EEEE-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvv 81 ffkv+ +++ ++++p +f +h g+ + +++ ++++++ gr+W++k+ +g++++++GW++F an + +gDf+v evm.model.AsparagusV1_03.2270 11 FFKVM--MGDFAT-QVRIPSEFK-KHlGE-SITQRSVVIRNSGGRQWRIKM--GIADGHVYFQNGWERFICANSITQGDFLV 85 56666..444444.599*****7.66443.345568***************..***************************** PP EEE-SSSEE CS B3 82 Fkldgrsef 90 F +dg+ +f evm.model.AsparagusV1_03.2270 86 FFYDGKFGF 94 **9885444 PP | |||||||
2 | B3 | 55.8 | 8.1e-18 | 189 | 273 | 11 | 99 |
HHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS B3 11 lksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 +++ +++p + a+++++ ++ +++l+d++g sW v+l+ ++ + r l++GW++ n+LkegD++v+++++ + evm.model.AsparagusV1_03.2270 189 ARTNYMTIPLQLAKKCNLYEK--DEIILRDPHGTSWPVRLSTWRDG-RLCLSSGWSNIYGKNRLKEGDVCVLEFVQG-CS 264 56788***********88744..48***************988885.889***********************9985.44 PP ..EEEEE-S CS B3 91 elvvkvfrk 99 +v++fr+ evm.model.AsparagusV1_03.2270 265 AINVHFFRA 273 479999986 PP | |||||||
3 | B3 | 30.8 | 5e-10 | 330 | 409 | 11 | 97 |
HHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS B3 11 lksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 l + +++pkk a+e +++ + t+ d+sg+sW v +i ++ g+ l+ G ++F + n+L egD + F+ + evm.model.AsparagusV1_03.2270 330 LYH--VRIPKKVAKEARLSSC--QNTTIIDPSGKSWAVDII-LRSYGQLELGIGLSSFSRGNNLAEGDKCEFEIFA--GD 402 333..79*********98854..467888***********7.55557899***********************543..22 PP ..EEEEE CS B3 91 elvvkvf 97 +v+++ evm.model.AsparagusV1_03.2270 403 YIRVHII 409 2455555 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 422 aa Download sequence |
MGNPKPNCPS FFKVMMGDFA TQVRIPSEFK KHLGESITQR SVVIRNSGGR QWRIKMGIAD 60 GHVYFQNGWE RFICANSITQ GDFLVFFYDG KFGFDVIIYG ATCCEKEACV DVPSEKVTIK 120 VESEGSGEEQ IVSPKGVGRK RKAKKMMTEN KMCYKVLRGA KPVANEKAMK AACAFKSPHP 180 HFVTTCRTAR TNYMTIPLQL AKKCNLYEKD EIILRDPHGT SWPVRLSTWR DGRLCLSSGW 240 SNIYGKNRLK EGDVCVLEFV QGCSAINVHF FRAEEYNAIS IPVSHERPGD IKESVSRPLT 300 ADYKESVANA PESSESSRPK FTILWNSNHL YHVRIPKKVA KEARLSSCQN TTIIDPSGKS 360 WAVDIILRSY GQLELGIGLS SFSRGNNLAE GDKCEFEIFA GDYIRVHIIR AGETNNSGTD 420 D* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G31640.1 | 4e-23 | B3 family protein |