PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_03.1057
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family GRAS
Protein Properties Length: 512aa    MW: 57090.4 Da    PI: 4.989
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_03.1057genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS357.22.5e-1091355051374
                           GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlar.svselykalppsetsekn....ss 75 
                                    lv+lLl+cAeav+ +d++la ++ +++  la ++gd+++R+ ++f+ +L++rl+  ++ +++ +l++ +t+++n     +
  evm.model.AsparagusV1_03.1057 135 LVHLLLACAEAVACRDTTLAASIFSQIWPLADQNGDSLKRVCFHFAVGLKSRLSLlQTVGVSGSLNTASTNKDNpivtKE 214
                                    68****************************************************9889999999*999999999998888 PP

                           GRAS  76 eelaalklfsevsPilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgsk 155
                                    e++ a++ ++e++P++ f++++aN  I +a++g++ +Hi+D+++s+ +QW +L+q Las +egpp++RiTg+ s + ++ 
  evm.model.AsparagusV1_03.1057 215 EKMEAFHHLYETTPYISFAFMAANDSICQAAKGKDYLHIVDLGMSHAIQWHNLIQMLASHSEGPPRIRITGITS-SDSRI 293
                                    88999999******************************************************************.44577 PP

                           GRAS 156 eeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvksls 235
                                      le+  + L k A+++gv++ef++  +++ + l+ e+L++++gE+l+ n++++lhr ++e+  + +   +vL ++k+l+
  evm.model.AsparagusV1_03.1057 294 SDLESNMKILLKNANTIGVHIEFRI--MNESSLLTAENLDIRQGETLVFNSIMHLHRYVKETRGSLK---AVLVAIKKLK 368
                                    888888889999************8..58999***************************77776666...9********* PP

                           GRAS 236 PkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekW 315
                                    P+++++veq+a+hn++ Fl+rfle+l+yysa+fdslea+l r s  r+k+E+ +++ +i+n++aceg er+erhe++ +W
  evm.model.AsparagusV1_03.1057 369 PELFTIVEQDANHNGPFFLARFLESLHYYSAVFDSLEASLTRSSLRRMKIENSYFADAIRNIIACEGGERVERHERADQW 448
                                    ******************************************************************************** PP

                           GRAS 316 rerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                                    r++l++aGF+ v +++  ++q+k+l++ ++ dgy+  +e+g+l+lgWk+rp++++SaW+
  evm.model.AsparagusV1_03.1057 449 RRQLGRAGFQGVGIES--VSQVKMLVSAYNCDGYTTGSEKGCLLLGWKGRPIMWASAWK 505
                                    ************9976..89**************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 512 aa     Download sequence    
MNIPPSYSSL STQQFPFTSV QSDEINFDEI LNKDMAIRRF CPERMDQDPD LKDYLFEIET  60
WSSSFDSSSP PCSGCDDEDS SFIDSVINTS LFEELPESTD NGFASYLEDT TMQPVLMDNA  120
DPDTAPASIN EGLELVHLLL ACAEAVACRD TTLAASIFSQ IWPLADQNGD SLKRVCFHFA  180
VGLKSRLSLL QTVGVSGSLN TASTNKDNPI VTKEEKMEAF HHLYETTPYI SFAFMAANDS  240
ICQAAKGKDY LHIVDLGMSH AIQWHNLIQM LASHSEGPPR IRITGITSSD SRISDLESNM  300
KILLKNANTI GVHIEFRIMN ESSLLTAENL DIRQGETLVF NSIMHLHRYV KETRGSLKAV  360
LVAIKKLKPE LFTIVEQDAN HNGPFFLARF LESLHYYSAV FDSLEASLTR SSLRRMKIEN  420
SYFADAIRNI IACEGGERVE RHERADQWRR QLGRAGFQGV GIESVSQVKM LVSAYNCDGY  480
TTGSEKGCLL LGWKGRPIMW ASAWKVNSSH S*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66350.13e-80GRAS family protein