PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_02.328
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family ERF
Protein Properties Length: 284aa    MW: 32308.4 Da    PI: 4.7352
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_02.328genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.11.1e-1880129255
                           AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                                   +++GVr++  +g+WvAeIr+p   + r  r +lg+f+ta eAa a++aa++ l+g
  evm.model.AsparagusV1_02.328  80 KFRGVRQRT-WGKWVAEIREP---N-RgSRLWLGTFDTALEAAVAYDAAARTLYG 129
                                   79****999.**********8...3.35***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 284 aa     Download sequence    
MERNREVPMK ENSMVDAQRK KKTRSRRNGD TVEQVLAKWQ QLNRNQEPQN PENSPRKPPA  60
KGSRKGCMQG KGGPENSEYK FRGVRQRTWG KWVAEIREPN RGSRLWLGTF DTALEAAVAY  120
DAAARTLYGS NARVNLPEPE ADASPESYES ATSSHDLNSV QETKVPKVEA TDDLTAEDSG  180
FGTAILKDKP KEEEWHFDQI QDLPEDMFNV DEWLRDMDMD PSRGTSSEQD KYAFTQGHFG  240
TIDALQQDGR FDADTYWHYD GAGASLLLQN QDEDLTRNFW HMD*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40340.15e-39ERF family protein