PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | evm.model.AsparagusV1_02.272 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
|
||||||||
Family | MYB | ||||||||
Protein Properties | Length: 205aa MW: 22647.2 Da PI: 7.0501 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 56.7 | 5.7e-18 | 12 | 57 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W +eEd lv++v+++G ++W++I++ ++ gR++k+c++rw + evm.model.AsparagusV1_02.272 12 KGAWNPEEDAALVKLVELHGAKNWTAISAGIP-GRSGKSCRLRWCNQ 57 79******************************.***********985 PP | |||||||
2 | Myb_DNA-binding | 53.6 | 5.2e-17 | 66 | 108 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++T+ Ed ++ a++++G++ W+tIar+++ gRt++ +k++w++ evm.model.AsparagusV1_02.272 66 PFTPAEDAAIIAAHARYGNK-WATIARMLQ-GRTDNAVKNHWNST 108 89******************.*********.***********986 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 205 aa Download sequence |
MEGGGENEEK VKGAWNPEED AALVKLVELH GAKNWTAISA GIPGRSGKSC RLRWCNQLSP 60 TVQHRPFTPA EDAAIIAAHA RYGNKWATIA RMLQGRTDNA VKNHWNSTLR RRKSQGDADD 120 REGEAKRVCR REEDHEKLVT SLSLRMPGDD KEEGGEGKEE EGTGGLREIM RGMIEEEVRR 180 YMSRLGFGDR GSSESLKAES TANS* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G50060.1 | 5e-46 | MYB family protein |