PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_02.1865 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | NAC | ||||||||
Protein Properties | Length: 262aa MW: 29510.1 Da PI: 6.1111 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 88.2 | 1.5e-27 | 17 | 158 | 3 | 128 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk.................kvkaeekewyfFskrd 65 pGf F+P+d lv +yL+++++g ++ + ++e+d+y++ePw+Lp+ ++eek++ fF++r+ evm.model.AsparagusV1_02.1865 17 PGFNFSPSDVHLVAFYLRRRISGVMIPS-SLVRELDVYSTEPWNLPAggllqpesegeysdlfgFPESEEKRMLFFTRRH 95 9*************************99.88***************668999999988877775334477899******* PP NAM 66 kkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfy.kgrapkgektdWvmheyrl 128 +a++++ nr + g W+ kdk+v++ +++++g + ++f g ++ ++t+W+mhe+rl evm.model.AsparagusV1_02.1865 96 PISARSRKFNRNAGCGLWHCGSKDKDVKH-GSQVIGYRLQFTFRkMGVGNQKVHTNWIMHEFRL 158 *****************************.9************9446888889*********98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 262 aa Download sequence |
METQEGADDL RTLFRYPGFN FSPSDVHLVA FYLRRRISGV MIPSSLVREL DVYSTEPWNL 60 PAGGLLQPES EGEYSDLFGF PESEEKRMLF FTRRHPISAR SRKFNRNAGC GLWHCGSKDK 120 DVKHGSQVIG YRLQFTFRKM GVGNQKVHTN WIMHEFRLDK ETNIDSLVLC KIFKRKHGEE 180 GDTGGLGAVT ALSGVSDGGE EEEEKEGRLE KRRRVVESGG LQKGLMDGYA EESSLFSAVY 240 ESIFLDDAGI DASSSFFPFH F* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 211 | 215 | KRRRV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G22290.1 | 1e-25 | NAC family protein |