PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_02.1779
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family B3
Protein Properties Length: 192aa    MW: 21548.5 Da    PI: 5.6068
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_02.1779genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B340.54.8e-13241061295
                                    HTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS
                             B3  12 ksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 
                                     s+rl+lp kf+++  ++kk e    +l ++ g+ W v++      ++++ + GW+e ++a++L  g f+vF++ g++ f
  evm.model.AsparagusV1_02.1779  24 FSNRLTLPTKFVKNVlMNKKGELGLASLVNPIGEIWHVEVYKHADEDMCIGGLGWSELAHAHNLGLGYFLVFRYRGDMVF 103
                                    4678********7779777788889***************4455555688889*********************999888 PP

                                    ..EEE CS
                             B3  91 elvvk 95 
                                       ++
  evm.model.AsparagusV1_02.1779 104 --DFR 106
                                    ..555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 192 aa     Download sequence    
MAQSLQCASS QSFSFFFRVL RPGFSNRLTL PTKFVKNVLM NKKGELGLAS LVNPIGEIWH  60
VEVYKHADED MCIGGLGWSE LAHAHNLGLG YFLVFRYRGD MVFDFRAFDL STCEIAYPSI  120
AHWVAKKLEQ TLPVLIDIED EEEECSNSSR VSTESYSGYE KEELTKSNPA GGVCFEVKLS  180
ARYLYRGHVE G*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31690.19e-13B3 family protein