PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_02.1651
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family B3
Protein Properties Length: 360aa    MW: 41111.6 Da    PI: 9.8006
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_02.1651genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3696.3e-22351151399
                                    TT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS
                             B3  13 sgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 
                                    s+++ +pkkf +++++  e s+ ++l+++sg  W+v+l   k+s+++ ++ GW eFvk+n+++egDfv+Fk++g+s+f  
  evm.model.AsparagusV1_02.1651  35 SQQMKIPKKFSDHFKS--ELSQNVILRSPSGTIWSVEL--AKTSDEISFQVGWDEFVKDNHIQEGDFVIFKYNGNSCF-- 108
                                    5679******966654..48899***************..**************************************.. PP

                                    EEEEE-S CS
                             B3  93 vvkvfrk 99 
                                    ++++f++
  evm.model.AsparagusV1_02.1651 109 KFSIFKR 115
                                    8888876 PP
2B347.63e-15257353299
                                    EEE-..-HHHHT.T-EE--HHH.HTT---..--SEEEEEE.TTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-E CS
                             B3   2 fkvltpsdvlks.grlvlpkkfaeehggkkeesktltled.esgrsWevkliyrkksgryvltkGWkeFvkangLkegDf 79 
                                    ++v+ p +vl s + +++p +fa++h   +++s++++l    + ++W+v +i+ ++ +  ++++ W+ F+++ +L+ gD+
  evm.model.AsparagusV1_02.1651 257 VSVMHPYSVLGSgKTFIIPSSFAANHL--PRRSMQVSLGIpGHRKKWQVSYIVGNSTS--WFGGKWNTFAHDSRLQNGDV 332
                                    5566666666554789*******8885..468999*99885677*******7666654..5899**************** PP

                                    EEEEE-SS.SEE..EEEEE-S CS
                             B3  80 vvFkldgr.sefelvvkvfrk 99 
                                    ++F+l+++  +f++ v++ r+
  evm.model.AsparagusV1_02.1651 333 CLFELVKKrGNFTMEVHIARA 353
                                    ****99777*******99875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 360 aa     Download sequence    
MEDCEICISY KEHCYWKHQG LKGKQFYEVM EGDFSQQMKI PKKFSDHFKS ELSQNVILRS  60
PSGTIWSVEL AKTSDEISFQ VGWDEFVKDN HIQEGDFVIF KYNGNSCFKF SIFKRDHCER  120
ASSSVLKKGN LETGRKSDDS VEYLDIKSHN EVMVISSDNS RPSSSFSGQN CRAPRNYQRA  180
GVSYNQKITR SNSTHQKKNL GQSCRMKYIK QESDDIISRE MFSRRNIYFP RKRLSGADEN  240
KALMLAKSVQ SRNPCFVSVM HPYSVLGSGK TFIIPSSFAA NHLPRRSMQV SLGIPGHRKK  300
WQVSYIVGNS TSWFGGKWNT FAHDSRLQNG DVCLFELVKK RGNFTMEVHI ARAASSSIC*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.13e-25B3 family protein