PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_02.1321

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

Protein Properties

Length: 558aa MW: 63426.2 Da PI: 9.2244

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_02.1321	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	41.3	2.7e-13	19	106	1	97
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfv 80 ffk++ +k+ l +p k ++++g + ++t++l+d++g+sW+vkl + +gr + +GW +Fv ++ ++ g f+ evm.model.AsparagusV1_02.1321 19 FFKIM--LGDFKRF-LHIPLKLTKTIGCS--DKQTVILRDSTGQSWRVKL--SVVDGRLAFCEGWDDFVLDHSINYGQFI 91 66777..7777776.9*****999766..4459***********..999999999*************** PP EEEE-SSSEE..EEEEE CS B3 81 vFkldgrsefelvvkvf 97 v+kl++ +f ++v++f evm.model.AsparagusV1_02.1321 92 VLKLIE--KFVFRVRIF 106 *986..676688877 PP

Sequence ? help Back to Top
Protein Sequence Length: 558 aa Download sequence
MERRAADFSK THDQIPSSFF KIMLGDFKRF LHIPLKLTKT IGCSDKQTVI LRDSTGQSWR 60 VKLSVVDGRL AFCEGWDDFV LDHSINYGQF IVLKLIEKFV FRVRIFGLST CEIIDFDEKR 120 NTKRTGIKRK TTEKTFGDSG FGSKIDKAGK EKASACNLKV LKTNDKGLEH VGKIYTNKVS 180 PIVNEKRNNK STGVKRKVTD KTLEVYGLGC KTDNRHALKK VSEEKTSTSN LKVQKTIEKS 240 SGHVNNTVSH VVISKSSEEH LAATKIPLPL TEMPCDIAKK LGGDETNAMY SSEKSYSWDT 300 LEDAIALEVV NRKFLLTESG VCHIVDENIE KPVIDLTADE SKNYRLRSMK IDKKPQGNKK 360 IEKPAIDLTE YESRNYRLRS SKIGEKSQGN ENIEKLVIDL KEDESSEDET NAMYTSEKSY 420 SWDTLEDAIA LEVVNRKFLL TENGVCHIVD ENIEKPVIDL TADESKNYRL RSMKIDKKPQ 480 GNKKIEKPAI DLTEYESRNY RLRSSKIGEK SQGNENIEKL VIDLKEDESR NFRLKSSKSG 540 KKYLCKGNYP EVENFVH*

Sequence ? help Back to Top

Protein Sequence Length: 558 aa Download sequence

MERRAADFSK THDQIPSSFF KIMLGDFKRF LHIPLKLTKT IGCSDKQTVI LRDSTGQSWR  60
VKLSVVDGRL AFCEGWDDFV LDHSINYGQF IVLKLIEKFV FRVRIFGLST CEIIDFDEKR  120
NTKRTGIKRK TTEKTFGDSG FGSKIDKAGK EKASACNLKV LKTNDKGLEH VGKIYTNKVS  180
PIVNEKRNNK STGVKRKVTD KTLEVYGLGC KTDNRHALKK VSEEKTSTSN LKVQKTIEKS  240
SGHVNNTVSH VVISKSSEEH LAATKIPLPL TEMPCDIAKK LGGDETNAMY SSEKSYSWDT  300
LEDAIALEVV NRKFLLTESG VCHIVDENIE KPVIDLTADE SKNYRLRSMK IDKKPQGNKK  360
IEKPAIDLTE YESRNYRLRS SKIGEKSQGN ENIEKLVIDL KEDESSEDET NAMYTSEKSY  420
SWDTLEDAIA LEVVNRKFLL TENGVCHIVD ENIEKPVIDL TADESKNYRL RSMKIDKKPQ  480
GNKKIEKPAI DLTEYESRNY RLRSSKIGEK SQGNENIEKL VIDLKEDESR NFRLKSSKSG  540
KKYLCKGNYP EVENFVH*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G34400.1	7e-13	B3 family protein