PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_01.79 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | WRKY | ||||||||
Protein Properties | Length: 234aa MW: 25685.9 Da PI: 8.7163 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 96.3 | 2.1e-30 | 140 | 199 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dgy+WrKYGqK+ k++++pr+Y+rC++a Cpvkkkv+rsaed ++++ tYegeH+h+ evm.model.AsparagusV1_01.79 140 VKDGYQWRKYGQKVTKDNPCPRAYFRCSFApACPVKKKVQRSAEDRSMLVATYEGEHTHP 199 58***************************99****************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 234 aa Download sequence |
MGSSWFNQTP INLDLNIGPQ HRRNPLMKEE TGSLPLAGKT SSPREELEAK LERMSEENER 60 LKEKLASMQA SYALLQNKLV DVMATSSSEV AGPPSPTKKR KGDDSAEMSD DSCKRLREEA 120 RPMISKLCVR TDPSDPSLVV KDGYQWRKYG QKVTKDNPCP RAYFRCSFAP ACPVKKKVQR 180 SAEDRSMLVA TYEGEHTHPG SSSQIEPPNG DGLNLSSAAS AHPSPQVRPS PST* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G80840.1 | 2e-49 | WRKY family protein |