PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_01.646 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | WRKY | ||||||||
Protein Properties | Length: 216aa MW: 24102.7 Da PI: 10.6896 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 94.1 | 9.9e-30 | 158 | 215 | 2 | 58 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnh 58 D+++WrKYGqK++kgs+fpr+YY+C+s gCp++k+ver+ ++p+++++tYeg+H+h evm.model.AsparagusV1_01.646 158 TDECSWRKYGQKPIKGSPFPRGYYKCSSVrGCPARKHVERAVDEPSMLIVTYEGDHRH 215 699************************988**************************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 216 aa Download sequence |
MERLIFQLSQ QNSEIDCREI TNHTVSKFRK MISILNRTGH ARFRRGPSPP PEESPATPSP 60 AVNTPAISRP LTLDFPKMRI DGDKSSFSIP TPISSANSSF LSSITGDXXX XXXXXKKKCR 120 SHGSLIAGSC HCSMKRKSRV RRTIRVPAIS SKIADIPTDE CSWRKYGQKP IKGSPFPRGY 180 YKCSSVRGCP ARKHVERAVD EPSMLIVTYE GDHRH* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G31550.1 | 1e-64 | WRKY family protein |