PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_01.597 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 252aa MW: 28077.2 Da PI: 5.2325 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 63.9 | 2.2e-20 | 73 | 127 | 3 | 57 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 k++++t+eq++ Le Fe + ++ e+++eLAkklgL+ rqV vWFqNrRa++k+ evm.model.AsparagusV1_01.597 73 KKRRLTTEQVQLLEMSFETETKLEPERKTELAKKLGLQPRQVAVWFQNRRARWKN 127 56789************************************************95 PP | |||||||
2 | HD-ZIP_I/II | 128.8 | 2.3e-41 | 72 | 164 | 1 | 93 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLe 81 ekkrrl++eqv+lLE+sFe+e+kLeperK+ela++LglqprqvavWFqnrRAR+k+kqlE+ +++Lk+ayd+l +++e+L evm.model.AsparagusV1_01.597 72 EKKRRLTTEQVQLLEMSFETETKLEPERKTELAKKLGLQPRQVAVWFQNRRARWKNKQLERGFDRLKAAYDSLLADHESLL 152 69******************************************************************************* PP HD-ZIP_I/II 82 keveeLreelke 93 +++++Lr+++++ evm.model.AsparagusV1_01.597 153 TDNARLRSQITT 164 ********9975 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 252 aa Download sequence |
MDSGRLIFNS SSSSSSSRHG HMLFLGRSGN SIFQGGSWMA GMEEASANKR RPFFTTHEEL 60 LEEEYYDDQL PEKKRRLTTE QVQLLEMSFE TETKLEPERK TELAKKLGLQ PRQVAVWFQN 120 RRARWKNKQL ERGFDRLKAA YDSLLADHES LLTDNARLRS QITTLAEKLQ TKELTVAEPA 180 GESVTGSRMG GMVDGDSLQL VDSSSGSESY FHNTFSGHCI VEAVGGGGVH SEEDDGSDDG 240 CNIARSPLFC W* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 121 | 129 | RRARWKNKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G01470.1 | 5e-66 | HD-ZIP family protein |