PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_01.405 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 171aa MW: 19081.1 Da PI: 9.9947 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 38.9 | 1.5e-12 | 49 | 79 | 26 | 56 |
-HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 26 saeereeLAkklgLterqVkvWFqNrRakek 56 ++++e LA++l+L+ rqV vWFqNrRa+ k evm.model.AsparagusV1_01.405 49 VETQKEALASRLRLKPRQVEVWFQNRRARTK 79 57899************************98 PP | |||||||
2 | HD-ZIP_I/II | 90.5 | 2e-29 | 43 | 113 | 19 | 89 |
HD-ZIP_I/II 19 eeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLre 89 ++e++ ++K++la++L+l+prqv+vWFqnrRARtk+kq+E+++e+Lkr++ +l++en+rL++eveeLr+ evm.model.AsparagusV1_01.405 43 PASEEMVETQKEALASRLRLKPRQVEVWFQNRRARTKLKQTEMECEYLKRCFGSLSQENKRLQREVEELRA 113 566777889************************************************************94 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 171 aa Download sequence |
MGGFGISPLG LELTMAVPGS MSSSSVSEGV GYNITRDLDI NLPASEEMVE TQKEALASRL 60 RLKPRQVEVW FQNRRARTKL KQTEMECEYL KRCFGSLSQE NKRLQREVEE LRAMRVTPPT 120 ILSPQTRLPI PASALTMCPR CQRVTTAAPS AQNRRDGRRP LARGYIVVEC * |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 74 | 82 | RRARTKLKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G01430.1 | 3e-42 | HD-ZIP family protein |