PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_01.40

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

bZIP

Protein Properties

Length: 324aa MW: 35103.2 Da PI: 5.6215

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_01.40	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	49.5	9.5e-16	96	143	3	50
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 +lkr rr+ +NRe+ArrsR+RK+a ++ Le v++L +eN +L k+l evm.model.AsparagusV1_01.40 96 DLKRMRRMVSNRESARRSRKRKQAHLADLELQVDQLRGENASLYKQLT 143 69*****************************************97765 PP

Sequence ? help Back to Top
Protein Sequence Length: 324 aa Download sequence
MLGSHESGGQ TTGTTQIWSQ NHTTTTPRKH SSISANLESQ SSLCTGSPTS SLKPKGHVEI 60 QTPAAGGGGT SGSEQSDDEY SLEIDAGSCD NPNVTDLKRM RRMVSNRESA RRSRKRKQAH 120 LADLELQVDQ LRGENASLYK QLTDANHEFG DAVTDNRVLK SDVEALRVKV KMAEDLVTRG 180 SLTCSLDHLL QTQIAVPPNP PALTNLHSSP VTGQTQGRES IAAKLVANLI TEAGANRVLA 240 CDLRSGQSMG YFDIPVNHVD VLPKVRWVLP DSYLDVKNKD YGVCTYIDAL LVSLCYTQDD 300 EEEAEEGEEG LSKCIGKELK KLL*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	111	117	RRSRKRK
2	111	118	RRSRKRKQ
3	113	118	SRKRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G24800.1	5e-46	bZIP family protein