PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_01.3515
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family G2-like
Protein Properties Length: 290aa    MW: 32047.7 Da    PI: 7.393
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_01.3515genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like107.28.7e-3448102155
                        G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                                    ++rlrWt+eLHerFv+av+qLGG+++AtPk +l++m+v+gLt++hvkSHLQkYRl
  evm.model.AsparagusV1_01.3515  48 RQRLRWTHELHERFVDAVTQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQKYRL 102
                                    58****************************************************8 PP
2Myb_DNA-binding64.61.9e-2050101148
                                    TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
                Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 
                                    r+rWT e++e++vdav+qlGg+   t+k + r mg +g+t +++ks++qky+
  evm.model.AsparagusV1_01.3515  50 RLRWTHELHERFVDAVTQLGGPdraTPKGVLRVMGvQGLTIYHVKSHLQKYR 101
                                    89*************************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 290 aa     Download sequence    
MYQPKPVSSL GPNHGNSLAR DSQLELSDNM MSPNSGSPNT NNPNMASRQR LRWTHELHER  60
FVDAVTQLGG PDRATPKGVL RVMGVQGLTI YHVKSHLQKY RLAKYIPESS SDGSKGEKKD  120
PGDMISGIEN SSGMQITEAL KLQMEVQKRL QEQLEVQRQL QLRIEAQGKY LKKIIEEQQR  180
LSGTLTETPD RNTTPAPISD PSTPAPISES PIQEKPTSAT AIFKNESFTS HHEPLTPDST  240
ARNGSSCEST MHERPIKRQR SNGKGDLVLG HHILESSSGS DFQQPSYDD*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01060.13e-82G2-like family protein