PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_01.3190
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family B3
Protein Properties Length: 466aa    MW: 52987.8 Da    PI: 8.6783
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_01.3190genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3665.4e-21999199
                                   EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEE CS
                             B3  1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvF 82
                                   ffkv+ p    +s+ l++p  f e+++ +  +sk + l+ +sg  W+v l   k  +++v+++GWkeFv ++ L +gDf+vF
  evm.model.AsparagusV1_01.3190  9 FFKVFFP--DQSSNYLRIPSAFRERIEVE--SSKIVYLKGQSGGIWKVGL--VKDCDGFVFEDGWKEFVADQSLAVGDFLVF 84
                                   7888844..444556********999854..889****************..****************************** PP

                                   EE-SSSEE..EEEEE-S CS
                             B3 83 kldgrsefelvvkvfrk 99
                                   +++g+s+f  +v vf++
  evm.model.AsparagusV1_01.3190 85 RYNGNSRF--KVLVFDS 99
                                   ****9999..8888876 PP
2B358.71e-18359448398
                                    EE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEE CS
                             B3   3 kvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvF 82 
                                    +++  s+v +s ++++p  f++eh  k  e++ lt+ d+sg+ W++++i +++ g+  l++GW++F +a++L+  D++vF
  evm.model.AsparagusV1_01.3190 359 TIMQDSYVYTSFLMCIPSWFVREHLPK--ENTVLTVWDPSGKPWKMTFICNNTHGA--LSGGWSRFSHAHNLEKYDVCVF 434
                                    567889******************533..5569***************98888877..9********************* PP

                                    EE-SSSEE..EEEEE- CS
                             B3  83 kldgrsefelvvkvfr 98 
                                    +l++   ++l+v+++r
  evm.model.AsparagusV1_01.3190 435 ELTK--PTHLKVHIYR 448
                                    *865..7777999987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 466 aa     Download sequence    
MAKSTPRYFF KVFFPDQSSN YLRIPSAFRE RIEVESSKIV YLKGQSGGIW KVGLVKDCDG  60
FVFEDGWKEF VADQSLAVGD FLVFRYNGNS RFKVLVFDST ACEKKKAFLA RPSIEEDTEF  120
FEDSEESKET EEDEEEEDNK PLIHFTNRRL NGFLKRSRGS NNLFDVNGSY KKRKQLQSEV  180
DQSNSKRSKS SSICGEAHLS LDSGAEATPK GTRLVSDGGK DHPTLECKDL VIPKQEYESY  240
SPLLSSSFSR DTPIHRNGES IHKTAAFSLR CSKINKQVKL CCQSGQVSRC SPQSTKGSTS  300
RKSSGTLALV KSEESACRQR SIFRIGAFIS QRRPVTEEEV ERTLQRALSF TSEYPFVITI  360
MQDSYVYTSF LMCIPSWFVR EHLPKENTVL TVWDPSGKPW KMTFICNNTH GALSGGWSRF  420
SHAHNLEKYD VCVFELTKPT HLKVHIYRVV EEITPLVRRR RGNCS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66980.13e-16B3 family protein