PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_01.2787 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | bHLH | ||||||||
Protein Properties | Length: 181aa MW: 20364.5 Da PI: 9.318 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 35 | 2.5e-11 | 17 | 65 | 6 | 54 |
HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 + +E++RR +++s ++L +l+Pk+ + p+ ls + L +A +YIk L evm.model.AsparagusV1_01.2787 17 KVVEKNRRIHMKSLCFKLSSLIPKDHNFPKDALSQYDHLDQAADYIKTL 65 689*********************76778888***************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 181 aa Download sequence |
MKGGYGSGGS GAKIDRKVVE KNRRIHMKSL CFKLSSLIPK DHNFPKDALS QYDHLDQAAD 60 YIKTLRERIE SLKQRKKCAM GKEKYKEVGG EMSNEFGLPL IEVRHQDSIL EVILITGLKK 120 RFMFYEVIGV LEEEGAEVVN ASFSVVGDKI FYTIHSQAIS SRIGLEASRV SERLNELIQQ 180 * |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G20970.1 | 7e-31 | bHLH family protein |