PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_01.2060

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

TALE

Protein Properties

Length: 536aa MW: 60092.9 Da PI: 6.2322

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_01.2060	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	26.9	8.5e-09	456	494	18	54
HHHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 18 lFek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 +Fe+ ++yp+ +e++ LA k gLt +qV++WF N R + evm.model.AsparagusV1_01.2060 456 MFENflHPYPKDSEKQLLALKSGLTRSQVSNWFINARVR 494 5776679******************************88 PP
2	BELL	61.9	1.4e-20	325	396	1	72
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 ++qe kk+ L ++l+ Vd++ kqy +q+q vis F+ + lg+ ++ +++Al+++S +++L+ +ia+q+ evm.model.AsparagusV1_01.2060 325 QNQETDGKKSELCTMLQAVDHQCKQYLDQMQSVISTFNDKINLGAPQMNVQFALHTVSTLYKNLRKKIASQV 396 5789999***************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 536 aa Download sequence
MPIMMENDMF TSSLPMTDHS HMIFNPTTPQ MLSGSFIQYG IQDNLSYRQI MPSAPLFSTV 60 QEEALNNLYT SNNGDMINSE VSVSRIMPHV GNISLNGSDG FTGNLISSFP NLASAEANLH 120 ESFISFGIAP TSALPSEELR NSQSTDSCTT HNSSIDASMH HDFGVPTAQK DADLSACLNS 180 RWNYDDVAGH QITVRPSYHI SERSEFGFNF NTPYAHFAPG NELSLSLGSS QPSVINFSTA 240 SDQCSEVSYS GLKHDSTGLQ NHCRGVGFQF PRVKLDSRYL NATKEILAEI ASYALEHLDD 300 VDDPLDRTEC EPKMSSLSSS INGLQNQETD GKKSELCTML QAVDHQCKQY LDQMQSVIST 360 FNDKINLGAP QMNVQFALHT VSTLYKNLRK KIASQVISTS HNHSDNESFR QKERNFESSF 420 IQKQWAIQQL KKNDTQSWRP QRGLPEKSVS VLRAWMFENF LHPYPKDSEK QLLALKSGLT 480 RSQVSNWFIN ARVRLWKPMI EEMYSEINKR NRTEEGSAAE SRNNGSISNQ RIRMS*

Sequence ? help Back to Top

Protein Sequence Length: 536 aa Download sequence

MPIMMENDMF TSSLPMTDHS HMIFNPTTPQ MLSGSFIQYG IQDNLSYRQI MPSAPLFSTV  60
QEEALNNLYT SNNGDMINSE VSVSRIMPHV GNISLNGSDG FTGNLISSFP NLASAEANLH  120
ESFISFGIAP TSALPSEELR NSQSTDSCTT HNSSIDASMH HDFGVPTAQK DADLSACLNS  180
RWNYDDVAGH QITVRPSYHI SERSEFGFNF NTPYAHFAPG NELSLSLGSS QPSVINFSTA  240
SDQCSEVSYS GLKHDSTGLQ NHCRGVGFQF PRVKLDSRYL NATKEILAEI ASYALEHLDD  300
VDDPLDRTEC EPKMSSLSSS INGLQNQETD GKKSELCTML QAVDHQCKQY LDQMQSVIST  360
FNDKINLGAP QMNVQFALHT VSTLYKNLRK KIASQVISTS HNHSDNESFR QKERNFESSF  420
IQKQWAIQQL KKNDTQSWRP QRGLPEKSVS VLRAWMFENF LHPYPKDSEK QLLALKSGLT  480
RSQVSNWFIN ARVRLWKPMI EEMYSEINKR NRTEEGSAAE SRNNGSISNQ RIRMS*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32980.1	9e-73	TALE family protein