PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_01.2034
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family MYB_related
Protein Properties Length: 283aa    MW: 31264 Da    PI: 7.7859
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_01.2034genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding41.82.5e-1363107347
                                    SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
                Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                                    +WT+eE+  ++ + ++lG+g+W+ Iar +   Rt+ q+ s+ qky
  evm.model.AsparagusV1_01.2034  63 PWTEEEHRMFLLGLQKLGKGDWRGIARNFVVSRTPTQVASHAQKY 107
                                    8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 283 aa     Download sequence    
MKKSASMGNL SSSSSSSAHF NNPGSPGSDP TRDHDRSGYA SDDPTHASCS SSNCRSERKK  60
GTPWTEEEHR MFLLGLQKLG KGDWRGIARN FVVSRTPTQV ASHAQKYFIR QTNASRRKRR  120
SSLFDMVPEM QMDQLQVLDE KQHMLRSPTD PDTTNHLQSL HLLQDQETEP AEKSSITLPP  180
EIKETVTYSN IPLPPGHTFY PTAFIPMPYP FWPPTPAPQK AETTTETHEV LKPTPILPKE  240
SKNVDEVVGM SKLSIGEGTG SRMEPSALSL KLMDSSADSG RS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47390.14e-66MYB_related family protein