PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_01.1784
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family B3
Protein Properties Length: 487aa    MW: 55057 Da    PI: 7.4103
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_01.1784genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B350.53.7e-16319409198
                                    EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EE CS
                             B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfv 80 
                                    f+k  ++s+v++s ++ +p kf+ee+ ++++  + ++lede+g + +v++   +++g+  l++GWk+F ++++L+ gD +
  evm.model.AsparagusV1_01.1784 319 FVKSVMRSHVSTSFWIGFPPKFCEEN-LPTRDRVRMVLEDEKGVEHNVNY--IGYRGG--LRGGWKGFGEDHNLEIGDAL 393
                                    899********************999.56678899***************..888887..9******************* PP

                                    EEEE-SSSEE..EEEEE- CS
                             B3  81 vFkldgrsefelvvkvfr 98 
                                    +F l++ ++f  +v +++
  evm.model.AsparagusV1_01.1784 394 LFVLTEPKRF--KVYIIK 409
                                    ***9876777..887776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 487 aa     Download sequence    
MAAISNLGNT NQMLLEPATS SNGAKIPELE IANFVARQDA EKWQRNCSAL EEKLARLEED  60
CGVLREREVK DRERIKSLVE ELERKERDFR EKFVEVVELR RKCEELEGEI SGLRGNAVKM  120
PDEMPKRGKE DRVVTPEQKR SRELVAANSE SEGESDDGVL LRQLKKKRVM EVGYEADKGD  180
ECKEPCDEGD TEVDEEADSR IPLVPMNGVK EGFGLNSKGL LEVAKSEYKL LTRNRSPRSK  240
RKFKSFIARC SSTARNSVIS DYDGVAADLG PRSYCRRNSK IQNRERGYTG RIASSEEKNR  300
AITRAEELQR NLNSDHPSFV KSVMRSHVST SFWIGFPPKF CEENLPTRDR VRMVLEDEKG  360
VEHNVNYIGY RGGLRGGWKG FGEDHNLEIG DALLFVLTEP KRFKVYIIKA NHEPAGDLDD  420
KIAEGDTPVI HKQSENTSSA EADTPAISEQ AEGSNRAKTR GKPLRFRFVR RNIPKLEMPS  480
KPEGRV*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G58280.17e-29B3 family protein