PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_01.1410
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family NAC
Protein Properties Length: 319aa    MW: 35472.7 Da    PI: 8.2714
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_01.1410genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM167.93.3e-52121392128
                            NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksg 81 
                                    ppGfrFhPtd+el+++yL kkv++++++++++i++vdiyk++Pw+Lp k   +e ew+fFs+rd+ky++g+r+nr++ sg
  evm.model.AsparagusV1_01.1410  12 PPGFRFHPTDQELITHYLSKKVTSSQTPATSIIADVDIYKFNPWELPDKGLFGEGEWFFFSPRDRKYPNGSRPNRSAGSG 91 
                                    9****************************999***************66566889************************* PP

                            NAM  82 yWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                                    yWkatg dk+++++ +++  g+kk+Lvfykgr pkg+ktdWvmheyrl
  evm.model.AsparagusV1_01.1410  92 YWKATGVDKPIIATgGSQCLGVKKSLVFYKGRPPKGTKTDWVMHEYRL 139
                                    ************99566679**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 319 aa     Download sequence    
MENFGLLGSR FPPGFRFHPT DQELITHYLS KKVTSSQTPA TSIIADVDIY KFNPWELPDK  60
GLFGEGEWFF FSPRDRKYPN GSRPNRSAGS GYWKATGVDK PIIATGGSQC LGVKKSLVFY  120
KGRPPKGTKT DWVMHEYRLL DHNKSSSWSQ KHKGSMRLDD WVLCRVRQKG SCPSASETAD  180
KDENKISTNS CFSQNSKQQK ALGEERTNNL YEWSDNQLLC YLMSLQEGGG ASTAGSHSSE  240
PFSIDDTNGC GYADASAKPP QHVSSVLDSI KRKLSFCALD ELMLLPPNKR LHYSHNVYVE  300
SSPTSSSSVD QLFTESVI*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69490.11e-74NAC family protein