PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_01.1113
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family B3
Protein Properties Length: 269aa    MW: 30970.1 Da    PI: 10.1549
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_01.1113genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B346.75.8e-1524971590
                                   -EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS
                             B3 15 rlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90
                                    l++pk f++++ +g+  + k  +l +++g+sW +++ y+ ++++y+ ++GWke  +a++Lk g ++vF+++g++  
  evm.model.AsparagusV1_01.1113 24 KLIIPKAFVKHIlKGV--SIKRARLVNPNGNSWLINI-YKENQCMYFGGDGWKELIHAHNLKLGYILVFSYKGNMVL 97
                                   599******7778666..4457***************.9********************************997665 PP
2B358.51.2e-18130215386
                                    EE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE.....EEETTEEEE-TTHHHHHHHHT--TT-E CS
                             B3   3 kvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliy...rkksgryvltkGWkeFvkangLkegDf 79 
                                     v ++s++l++++l++p +f+++++g  ++  +l+l+d++g+sW v l++    k+++++ +++GW +F+k n L+ gD 
  evm.model.AsparagusV1_01.1113 130 EVIMTSHNLSRQCLYIPVEFTRQCDGLAHR-HELILKDSKGQSWPVHLCHrkmAKHGSGMHIGGGWLQFAKGNSLDIGDK 208
                                    56789*******************666545.49***************99666666666889****************** PP

                                    EEEEE-S CS
                             B3  80 vvFkldg 86 
                                    ++Fkl +
  evm.model.AsparagusV1_01.1113 209 CIFKLLQ 215
                                    ****865 PP
Sequence ? help Back to Top
Protein Sequence    Length: 269 aa     Download sequence    
MATPTPHPCS SRFFRILWPS FIQKLIIPKA FVKHILKGVS IKRARLVNPN GNSWLINIYK  60
ENQCMYFGGD GWKELIHAHN LKLGYILVFS YKGNMVLNFR AYDLSTCEIT YPSKVFNAKI  120
RNPKVPKNFE VIMTSHNLSR QCLYIPVEFT RQCDGLAHRH ELILKDSKGQ SWPVHLCHRK  180
MAKHGSGMHI GGGWLQFAKG NSLDIGDKCI FKLLQTSLCC LPDVFWNNRS KESRVIIEEE  240
LQQKIEETMP VQKQRKQGDN RRRASAED*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31690.13e-27B3 family protein