PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023878588.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 250aa MW: 29239.2 Da PI: 9.8396 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 95.7 | 2e-30 | 10 | 59 | 2 | 51 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 rienk+nrqvtfskRr g+lKKA+E+SvLCdaeva+i+fs++gkl+eys+ XP_023878588.1 10 RIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYST 59 8***********************************************96 PP | |||||||
2 | K-box | 100.7 | 2e-33 | 88 | 174 | 14 | 100 |
K-box 14 aeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 + s++ e+akLk+++e Lqr+q+h+ GedL+sLslkeLq+LeqqL+++lk+iR++Kn++++e+i++lqkk k+lqe+n++L kk++e XP_023878588.1 88 NGSWNLEHAKLKARMEVLQRNQKHFRGEDLDSLSLKELQSLEQQLDSALKHIRTRKNQVMHESISDLQKKDKALQEQNNSLAKKVKE 174 5789********************************************************************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 250 aa Download sequence |
MGRGRVQLRR IENKINRQVT FSKRRSGLLK KAHEISVLCD AEVALIVFST KGKLFEYSTD 60 SCMERILERY ERYSYAERRL LANDLEPNGS WNLEHAKLKA RMEVLQRNQK HFRGEDLDSL 120 SLKELQSLEQ QLDSALKHIR TRKNQVMHES ISDLQKKDKA LQEQNNSLAK KVKEKEKEIA 180 QQEQLWEQQN HTLESSSVLP QPLQPPQPLQ PWNIGRSYQA SGYGREEETT PSQNQANTLL 240 PPWMLRHLNQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G60910.1 | 7e-73 | MIKC_MADS family protein |