PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ro02_G23733 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
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Family | C2H2 | ||||||||
Protein Properties | Length: 271aa MW: 30375.4 Da PI: 6.5717 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 12.9 | 0.00034 | 33 | 55 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ Cgk+F + L H r H Ro02_G23733 33 HVCKVCGKRFETGNGLGGHTRIH 55 79**********99999999988 PP | |||||||
2 | zf-C2H2 | 11.3 | 0.0011 | 191 | 213 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C +C+k F++ L H ++H Ro02_G23733 191 HVCDICSKEFRTGQALGGHKSSH 213 79**********99999999888 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 271 aa Download sequence |
MKSFEEMESH FHEDDQWRRH HEVEHLQKSS KDHVCKVCGK RFETGNGLGG HTRIHNLLLP 60 NKKINKQLYH PSSQDYWKDV RRLRALSVSP SQSSSSATSS SSCESSPSDL TESDCDVEKS 120 LPSWGKKDVR GRSSTSTSST SASSLSAYQT VPNKPGEAAK IKADETSWSD KIVKPKMKMM 180 MRSNSEKSRK HVCDICSKEF RTGQALGGHK SSHYYYAGGT SVRVDQVVCD EDEGEEEEEE 240 EEEASTSVTN PKTLEFDLNQ LPLSEGTVEH K |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G27730.1 | 6e-07 | C2H2 family protein |