PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ro02_G23733
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
Family C2H2
Protein Properties Length: 271aa    MW: 30375.4 Da    PI: 6.5717
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ro02_G23733genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.90.000343355123
                 EEETTTTEEESSHHHHHHHHHHT CS
      zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                 ++C+ Cgk+F +   L  H r H
  Ro02_G23733 33 HVCKVCGKRFETGNGLGGHTRIH 55
                 79**********99999999988 PP

2zf-C2H211.30.0011191213123
                  EEETTTTEEESSHHHHHHHHHHT CS
      zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                  ++C +C+k F++   L  H ++H
  Ro02_G23733 191 HVCDICSKEFRTGQALGGHKSSH 213
                  79**********99999999888 PP

Sequence ? help Back to Top
Protein Sequence    Length: 271 aa     Download sequence    
MKSFEEMESH FHEDDQWRRH HEVEHLQKSS KDHVCKVCGK RFETGNGLGG HTRIHNLLLP  60
NKKINKQLYH PSSQDYWKDV RRLRALSVSP SQSSSSATSS SSCESSPSDL TESDCDVEKS  120
LPSWGKKDVR GRSSTSTSST SASSLSAYQT VPNKPGEAAK IKADETSWSD KIVKPKMKMM  180
MRSNSEKSRK HVCDICSKEF RTGQALGGHK SSHYYYAGGT SVRVDQVVCD EDEGEEEEEE  240
EEEASTSVTN PKTLEFDLNQ LPLSEGTVEH K
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27730.16e-07C2H2 family protein